CDS

Accession Number TCMCG017C07005
gbkey CDS
Protein Id OMP05704.1
Location complement(join(18094..18177,18626..18691,18987..19045,19176..19263,19501..19689,19771..19941,20091..20285,20427..20508,20753..20983,21168..21239,21366..21580))
GeneID InterPro:IPR000504
Organism Corchorus olitorius
locus_tag COLO4_08630

Protein

Length 483aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01013896.1
Definition hypothetical protein COLO4_08630 [Corchorus olitorius]
Locus_tag COLO4_08630

EGGNOG-MAPPER Annotation

COG_category A
Description U11 U12 small nuclear ribonucleoprotein 65 kDa
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13157        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005689        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010229        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0017069        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030626        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097157        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCTGTTCCATCCTCACAGCCTTTTAGCCATCCTCAAATGCAGCATTCTGTGTATCAAGGTGCTGAAAGAGCAACATCCAACCCTCAAGAATTGGATTATGTAGTAACCCTTTTGGTTCGGCATCTTCCAGAGGCCATTCCTCACGACACCCTTTCCCGGCTTTTCTCTCACTATGGTGCATCCTCTGTTCGTCCTTGTTCTACTGGAAAGTTGAGGAACTGTGCGTTTGTTGATTTCAAAAATGAAGCATTGGCTTCTCAAGCCCACCGTCAATTAAATGGCCTGAGGTTTCTTGGTAAAGTCTTATCAGTGGAGAGAGCCGGAAAGCTGACTGGCGATAGTAAACCTCAGCAAACTGGAGTTCTGCCTGGAAAGGATTTATCTGGATCTTCAGTGGAAGATACCAACTTGAATAGGGACCTGAATCAAGGTTCAAAATCAGGATCAATACCTGCTAGCGAACCAATTGCTCCTAGACTTGGTGTAGACTATCCTTTTCCTCCTCACCTTGAATATGCTTACCCTCCACCAGATGGAAATATTTTGACTAACATTGTTAATGCTCTTATTGCTGTTCCTCGCTTTTACACCCAGGTGCTGCACCTAATGAATAAAATGAATATTCCAGCTCCATTCCGTATGGCTTTGCCAACACCGCCTCTACCCCCTCCAATACCTGCACCACAGCTACCACCCCCACCCCCACCCCCACCACCTGCTTCCTTACCTGCAAAGCCTAATTTGGTAGATGCATCTTCTAGTGAATCAGAAATGGAGTCTTCAGATGAGGAGGTAAATAAAAAAGGTGTGACAAAACCTGCACGGAAGCGTGCCAAGCGAGAAGCTATTTTAGGCCCTGCAATTGATAAAAGCGTGGCTCATGAGGCTGTTGGAGTGAAACCTGCCACCTTGATCCCAAAAGAAATCCCATTGATAAAAAAGAAGAACCCTCTATTACAGATCAATATTGCCCCCAAACAGATTCCTAATGAACAGAAAGATGATAATGATGATGATGATGATGACTTGAAACAGATTTCAGAGGAACCTAATGAGGAGGATTCAGATGCTAAACGATTTGCTACTGCAGATGAGTTGGAAAAAGGAAAGTTGCCTCCAGAAGAAATCTTATCACTTCCAATGTTTAAGAATTATACAGCTGGGAATCCTGCTTCTGTGTTGTATATAAAGAACTTGGCAAAGGATGTTCTTCCTGAAGATTTCTATTTCATCTTTGGATCATTATTTGGAAGCATTGATGCAGCTAAATCCAGTCTTAATGTGAAGCTAATGCAGGAGGGAAGGATGAGGGGCCAAGCTTTTGTGACATTTCCATCAGTTGAACTTGCCCATCGTGCTTTGAACCTAGTAAATGGGTATGTGTTCAAAGGCAAACCAATAATCATCCAGTTTGGTCGGAATCCTGCCGCTGCAAAGACAACCTAA
Protein:  
MAAVPSSQPFSHPQMQHSVYQGAERATSNPQELDYVVTLLVRHLPEAIPHDTLSRLFSHYGASSVRPCSTGKLRNCAFVDFKNEALASQAHRQLNGLRFLGKVLSVERAGKLTGDSKPQQTGVLPGKDLSGSSVEDTNLNRDLNQGSKSGSIPASEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPPIPAPQLPPPPPPPPPASLPAKPNLVDASSSESEMESSDEEVNKKGVTKPARKRAKREAILGPAIDKSVAHEAVGVKPATLIPKEIPLIKKKNPLLQINIAPKQIPNEQKDDNDDDDDDLKQISEEPNEEDSDAKRFATADELEKGKLPPEEILSLPMFKNYTAGNPASVLYIKNLAKDVLPEDFYFIFGSLFGSIDAAKSSLNVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPIIIQFGRNPAAAKTT